Solyc05g054920.3.1 (Solyc05g054920.3)


Aliases : Solyc05g054920.3

Description : 27.1.1 RNA.processing.splicing encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. arginine/serine-rich zinc knuckle-containing protein 33 (RSZ33)


Gene families : OG_01_0003283 (Gene family) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g054920.3.1
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G37340 RSZ33,... arginine/serine-rich zinc knuckle-containing protein 33 0.06 Gene family
AT3G53500 At-RS2Z, RS2Z32, RSZ32 RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.04 Gene family
LOC_Os03g17710 Os03g0285900 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.02 Gene family
Zm00001d011004 GRMZM2G175419 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.04 Gene family
Zm00001d035552 GRMZM2G099317 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 175 191
IPR001878 Znf_CCHC 154 169
IPR000504 RRM_dom 13 73
No external refs found!