Cpa|evm.model.tig00021501.12


Description : 27.1 RNA.processing SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein


Gene families : OG_01_0003922 (Gene family) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021501.12
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G14650 No alias SWAP (Suppressor-of-White-APricot)/surp... 0.01 Gene family
Cre06.g307450 No alias 27.1 RNA.processing SWAP... 0.05 Gene family
Solyc04g005690.3.1 Solyc04g005690.3 27.1 RNA.processing SWAP... 0.02 Gene family
Zm00001d008293 GRMZM2G028156 27.1 RNA.processing SWAP... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000061 Surp 147 197
IPR000061 Surp 30 81
IPR000626 Ubiquitin_dom 580 642
IPR022030 SF3A1 215 408
No external refs found!