Solyc05g053680.2.1 (Solyc05g053680.2)


Aliases : Solyc05g053680.2

Description : 29.2.1.2.2.513 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A Ribosomal protein L13 family protein


Gene families : OG_01_0002244 (Gene family) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g053680.2.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G07110 No alias Ribosomal protein L13 family protein 0.43 Gene family
AT3G24830 No alias Ribosomal protein L13 family protein 0.38 Gene family
AT4G13170 No alias Ribosomal protein L13 family protein 0.19 Gene family
AT5G48760 No alias Ribosomal protein L13 family protein 0.32 Gene family
Cpa|evm.model.tig00000792.29 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.44 Gene family
Cre12.g532550 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.2 Gene family
GSVIVT01021080001 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.13 Gene family
GSVIVT01028661001 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os03g54890 Os03g0756000 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.31 Gene family
LOC_Os07g01870 Os07g0109500 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.26 Gene family
MA_186340g0010 No alias 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.07 Gene family
Smo166650 PACid_15417896 No description available 0.22 Gene family
Zm00001d013252 GRMZM2G072315 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.38 Gene family
Zm00001d034059 GRMZM2G090422 29.2.1.2.2.513 protein.synthesis.ribosomal... 0.44 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 21 118
IPR000070 Pectinesterase_cat 205 404
No external refs found!