Solyc05g053610.3.1 (Solyc05g053610.3)


Aliases : Solyc05g053610.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g053610.3.1
Cluster HCCA cluster: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.03 Gene family
GSVIVT01031378001 No alias 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_10432311g0010 No alias No description available 0.07 Gene family
Smo133564 PACid_15409124 No description available 0.03 Gene family
Smo412710 PACid_15413851 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo417263 PACid_15402303 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d016409 GRMZM2G057622 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d044442 GRMZM5G874955 34.16 transport.ABC transporters and multidrug... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 731 794
IPR013581 PDR_assoc 2113 2175
IPR013581 PDR_assoc 3498 3552
IPR003439 ABC_transporter-like 178 360
IPR003439 ABC_transporter-like 2237 2389
IPR029481 ABC_trans_N 2852 2920
IPR029481 ABC_trans_N 102 153
IPR029481 ABC_trans_N 1472 1535
IPR003439 ABC_transporter-like 2945 3127
IPR003439 ABC_transporter-like 1560 1742
IPR013525 ABC_2_trans 1896 2108
IPR013525 ABC_2_trans 1153 1367
IPR013525 ABC_2_trans 514 726
IPR013525 ABC_2_trans 3282 3493
IPR013525 ABC_2_trans 2534 2748
IPR003439 ABC_transporter-like 856 1008
No external refs found!