Solyc05g053565.1.1 (Solyc05g053565.1)


Aliases : Solyc05g053565.1

Description : 10.2.1 cell wall.cellulose synthesis.cellulose synthase encodes a gene similar to cellulose synthase cellulose synthase-like D1 (CSLD1)


Gene families : OG_01_0000749 (Gene family) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g053565.1.1
Cluster HCCA cluster: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT2G33100 CSLD1, ATCSLD1 cellulose synthase-like D1 0.04 Gene family
AT3G03050 ATCSLD3, KJK, CSLD3 cellulose synthase-like D3 0.04 Gene family
AT4G38190 ATCSLD4, CSLD4 cellulose synthase like D4 0.04 Gene family
GSVIVT01021798001 No alias 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.05 Gene family
GSVIVT01024398001 No alias 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.03 Gene family
LOC_Os06g02180 Os06g0111800 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.02 Gene family
LOC_Os06g22980 Os06g0336500 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.05 Gene family
LOC_Os08g25710 Os08g0345500 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.05 Gene family
Smo230382 PACid_15413227 No description available 0.02 Gene family
Zm00001d032387 GRMZM2G044269 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.04 Gene family
Zm00001d046014 GRMZM2G061764 10.2.1 cell wall.cellulose synthesis.cellulose synthase... 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA InterProScan
BP GO:0030244 cellulose biosynthetic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005150 Cellulose_synth 281 724
No external refs found!