Solyc05g053530.1.1 (Solyc05g053530.1)

Aliases : Solyc05g053530.1

Description : hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition. nine-cis-epoxycarotenoid dioxygenase 6 (NCED6)

Gene families : OG_01_0000949 (Gene family) Phylogenetic Tree(s): OG0000949_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g053530.1.1
Cluster HCCA cluster: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038080001 No alias hormone metabolism.abscisic... 0.02 Gene family
LOC_Os03g44380 Os03g0645900 hormone metabolism.abscisic... 0.04 Gene family
LOC_Os07g05940 Os07g0154100 hormone metabolism.abscisic... 0.03 Gene family
Zm00001d018819 GRMZM2G417954 hormone metabolism.abscisic... 0.02 Gene family
Zm00001d041319 GRMZM5G858784 hormone metabolism.abscisic... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 107 573
No external refs found!