Solyc05g053380.3.1 (Solyc05g053380.3)


Aliases : Solyc05g053380.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense. WRKY DNA-binding protein 48 (WRKY48)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g053380.3.1
Cluster HCCA cluster: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AT1G18860 WRKY61, ATWRKY61 WRKY DNA-binding protein 61 0.02 Gene family
AT1G66600 ABO3, WRKY63, ATWRKY63 ABA overly sensitive mutant 3 0.01 Gene family
AT2G04880 WRKY1, ZAP1, ATWRKY1 zinc-dependent activator protein-1 0.08 Gene family
AT2G37260 WRKY44, TTG2,... WRKY family transcription factor family protein 0.03 Gene family
AT5G24110 ATWRKY30, WRKY30 WRKY DNA-binding protein 30 0.01 Gene family
AT5G56270 WRKY2, ATWRKY2 WRKY DNA-binding protein 2 0.09 Gene family
GSVIVT01010525001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01012682001 No alias No description available 0.01 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01019511001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01022259001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01024624001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01028718001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01029265001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01030258001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01033063001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01033188001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01034968001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01035885001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g14440 Os01g0246700 No description available 0.01 Gene family
LOC_Os01g18584 Os01g0289600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g40430 Os01g0586800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os05g27730 Os05g0343400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os09g16510 Os09g0334500 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os10g18099 No alias No description available 0.07 Gene family
Solyc04g078550.3.1 Solyc04g078550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc06g068460.3.1 Solyc06g068460.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc07g047960.3.1 Solyc07g047960.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc08g008280.3.1 Solyc08g008280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc09g014990.3.1 Solyc09g014990.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc10g011910.3.1 Solyc10g011910.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d008578 GRMZM2G006497 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d010399 GRMZM2G449681 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d011527 GRMZM5G812272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d012482 GRMZM2G036703 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d016457 GRMZM2G073272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d020137 GRMZM2G025895,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d024768 GRMZM5G851490 No description available 0.02 Gene family
Zm00001d026218 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d035323 GRMZM2G143765 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d037054 GRMZM2G156529 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d038023 GRMZM2G012724 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038761 GRMZM2G401521 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d039245 GRMZM5G871347 No description available 0.01 Gene family
Zm00001d041958 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d043025 GRMZM2G148087 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d043569 GRMZM2G040298 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d044010 GRMZM2G408462 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d045375 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d049173 GRMZM2G054125 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d050247 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d052357 GRMZM2G063216 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 166 223
No external refs found!