Solyc05g052410.2.1 (Solyc05g052410.2)


Aliases : Solyc05g052410.2

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g052410.2.1
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
Cre16.g649433 No alias No description available 0.02 Gene family
GSVIVT01021098001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g09390 Os06g0194000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
MA_10274g0010 No alias No description available 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_40048g0010 No alias No description available 0.02 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_81029g0010 No alias No description available 0.03 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.03 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.03 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.04 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.02 Gene family
Zm00001d010048 GRMZM2G006745 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018081 GRMZM2G055204 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 89 139
No external refs found!