Solyc05g052050.1.1 (Solyc05g052050.1)


Aliases : Solyc05g052050.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g052050.1.1
Cluster HCCA cluster: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.06 Gene family
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.04 Gene family
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01020584001 No alias No description available 0.03 Gene family
GSVIVT01021098001 No alias No description available 0.02 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.01 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.05 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.01 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.01 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc01g090300.3.1 Solyc01g090300.3 No description available 0.04 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.04 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.02 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.03 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc05g052040.1.1 Solyc05g052040.1 No description available 0.04 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.04 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.04 Gene family
Solyc11g012980.1.1 Solyc11g012980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d002747 GRMZM2G028969 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d018158 GRMZM2G103085 No description available 0.04 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.04 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.02 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.02 Gene family
Zm00001d027929 No alias No description available 0.03 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.05 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 105 155
No external refs found!