Solyc05g052040.1.1 (Solyc05g052040.1)


Aliases : Solyc05g052040.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g052040.1.1
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.05 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.03 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.06 Gene family
AT3G61630 CRF6 cytokinin response factor 6 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.09 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.04 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013905001 No alias No description available 0.05 Gene family
GSVIVT01013913001 No alias No description available 0.05 Gene family
GSVIVT01013916001 No alias No description available 0.07 Gene family
GSVIVT01013917001 No alias No description available 0.03 Gene family
GSVIVT01013923001 No alias No description available 0.06 Gene family
GSVIVT01013931001 No alias No description available 0.04 Gene family
GSVIVT01013934001 No alias No description available 0.04 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
GSVIVT01020584001 No alias No description available 0.04 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01035852001 No alias No description available 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.02 Gene family
LOC_Os02g54160 Os02g0782700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_164803g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_2446g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_37766g0010 No alias No description available 0.03 Gene family
MA_4032g0010 No alias No description available 0.03 Gene family
MA_53147g0010 No alias No description available 0.02 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_81029g0010 No alias No description available 0.04 Gene family
MA_84578g0010 No alias No description available 0.02 Gene family
MA_9565296g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Smo92334 PACid_15417654 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.04 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.06 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.04 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d015639 GRMZM2G079653 No description available 0.03 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.07 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.05 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d027929 No alias No description available 0.06 Gene family
Zm00001d029884 GRMZM5G806839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.03 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.05 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.08 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d052102 GRMZM2G097081 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 210 260
No external refs found!