Solyc05g050380.3.1 (Solyc05g050380.3)


Aliases : Solyc05g050380.3

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g050380.3.1
Cluster HCCA cluster: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.05 Gene family
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.03 Gene family
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Gene family
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 Gene family
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.1 Gene family
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.05 Gene family
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.02 Gene family
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.02 Gene family
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.1 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.08 Gene family
GSVIVT01025208001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01027087001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
GSVIVT01029404001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os05g42250 Os05g0502000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g10580 Os06g0207700 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
MA_10425832g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.07 Gene family
MA_10435474g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
MA_10436286g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
MA_10437228g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc11g069580.2.1 Solyc11g069580.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d017281 GRMZM2G068904 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 53 376
No external refs found!