Pp3c8_3770V3.1


Description : Cleavage/polyadenylation specificity factor, 25kDa subunit


Gene families : OG_01_0003065 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003065_tree ,
OG_02_0003251 (LandPlants) Phylogenetic Tree(s): OG_02_0003251_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_3770V3.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.73 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 Archaeplastida
Mp8g17730.1 No alias component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex 0.03 Archaeplastida
MA_369030g0010 No alias component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex 0.02 LandPlants
Mp8g17730.1 No alias component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex 0.03 LandPlants
Zm00001e041963_P001 No alias component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005849 mRNA cleavage factor complex IEA Interproscan
BP GO:0006378 mRNA polyadenylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016706 Cleav_polyA_spec_factor_su5 44 231
No external refs found!