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  5. AMTR_s00130p00080480

AMTR_s00130p00080480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.37

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL1 component


Gene families : OG_01_0001793 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001793_tree ,
OG_02_0007821 (LandPlants) Phylogenetic Tree(s): OG_02_0007821_tree ,
OG_03_0007898 (SeedPlants) Phylogenetic Tree(s): OG_03_0007898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00080480
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT2G42710 No alias Ribosomal protein L1p/L10e family 0.03 Archaeplastida
Gb_26914 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 Archaeplastida
LOC_Os06g35470.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.05 Archaeplastida
MA_10112138g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia... 0.06 Archaeplastida
Solyc12g013990.3.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.02 Archaeplastida
Zm00001e037138_P001 No alias component mtRPL1 of large ribosomal subunit proteome 0.04 Archaeplastida
AT2G42710 No alias Ribosomal protein L1p/L10e family 0.02 LandPlants
Gb_26914 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 LandPlants
LOC_Os06g35470.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 LandPlants
MA_10112138g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia... 0.05 LandPlants
Solyc12g013990.3.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.02 LandPlants
Zm00001e037138_P001 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 LandPlants
AT2G42710 No alias Ribosomal protein L1p/L10e family 0.02 SeedPlants
Gb_26914 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 SeedPlants
LOC_Os06g35470.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 SeedPlants
MA_10112138g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia... 0.05 SeedPlants
Solyc12g013990.3.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.02 SeedPlants
Zm00001e037138_P001 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002143 Ribosomal_L1 264 461
No external refs found!