Pp3c8_24120V3.1


Description : photosystem II BY


Gene families : OG_01_0005644 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005644_tree ,
OG_02_0005003 (LandPlants) Phylogenetic Tree(s): OG_02_0005003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_24120V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 Archaeplastida
AT1G67740 YCF32, PSBY photosystem II BY 0.12 Archaeplastida
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.17 Archaeplastida
Gb_22296 No alias component PsbY of PS-II complex 0.08 Archaeplastida
LOC_Os08g02630.1 No alias component PsbY of PS-II complex 0.09 Archaeplastida
MA_12201g0010 No alias component PsbY of PS-II complex 0.1 Archaeplastida
Mp8g12730.1 No alias component PsbY of PS-II complex 0.22 Archaeplastida
Smo441673 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 Archaeplastida
Solyc10g077120.3.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e029235_P001 No alias component PsbY of PS-II complex 0.03 Archaeplastida
AMTR_s00049p00157390 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.15 LandPlants
AT1G67740 YCF32, PSBY photosystem II BY 0.11 LandPlants
Gb_22296 No alias component PsbY of PS-II complex 0.08 LandPlants
LOC_Os08g02630.1 No alias component PsbY of PS-II complex 0.12 LandPlants
MA_12201g0010 No alias component PsbY of PS-II complex 0.09 LandPlants
Mp8g12730.1 No alias component PsbY of PS-II complex 0.23 LandPlants
Smo441673 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 LandPlants
Solyc10g077120.3.1 No alias no hits & (original description: none) 0.11 LandPlants
Zm00001e029235_P001 No alias component PsbY of PS-II complex 0.03 LandPlants

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009388 PSII_PsbY 288 320
IPR009388 PSII_PsbY 210 242
IPR009388 PSII_PsbY 142 174
IPR009388 PSII_PsbY 371 403
No external refs found!