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  5. AMTR_s00130p00044920

AMTR_s00130p00044920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.16

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase


Gene families : OG_01_0000173 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000173_tree ,
OG_02_0000161 (LandPlants) Phylogenetic Tree(s): OG_02_0000161_tree ,
OG_03_0000127 (SeedPlants) Phylogenetic Tree(s): OG_03_0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00044920
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.02 Archaeplastida
MA_109703g0010 No alias A-class RAB GTPase 0.02 Archaeplastida
Solyc07g053480.4.1 No alias A-class RAB GTPase 0.03 Archaeplastida
GSVIVT01014181001 No alias Ras-related protein RIC2 OS=Oryza sativa subsp. japonica 0.02 LandPlants
MA_109703g0010 No alias A-class RAB GTPase 0.02 LandPlants
Solyc07g053480.4.1 No alias A-class RAB GTPase 0.03 LandPlants
GSVIVT01014181001 No alias Ras-related protein RIC2 OS=Oryza sativa subsp. japonica 0.02 SeedPlants
MA_109703g0010 No alias A-class RAB GTPase 0.02 SeedPlants
Solyc06g076450.3.1 No alias A-class RAB GTPase 0.01 SeedPlants
Solyc07g053480.4.1 No alias A-class RAB GTPase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!