Solyc05g018510.3.1 (Solyc05g018510.3)


Aliases : Solyc05g018510.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 4 (PDR4)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g018510.3.1
Cluster HCCA cluster: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.03 Gene family
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.08 Gene family
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.02 Gene family
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.04 Gene family
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Gene family
Cre07.g313250 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cre17.g728400 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01015456001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017185001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017202001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017676001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
GSVIVT01034748001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os01g08260 Os01g0177900 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os08g43120 Os08g0544400 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
MA_124091g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_135152g0010 No alias No description available 0.05 Gene family
MA_42871g0010 No alias No description available 0.02 Gene family
Smo115821 PACid_15402703 No description available 0.02 Gene family
Smo412710 PACid_15413851 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo96758 PACid_15410129 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g100180.2.1 Solyc12g100180.2 34.16 transport.ABC transporters and multidrug... 0.06 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Zm00001d036986 GRMZM2G029506 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.16 Gene family
Zm00001d043598 GRMZM2G000614 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d052726 GRMZM2G451792 34.16 transport.ABC transporters and multidrug... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 849 999
IPR013581 PDR_assoc 705 769
IPR003439 ABC_transporter-like 152 334
IPR029481 ABC_trans_N 65 127
IPR013525 ABC_2_trans 490 700
IPR013525 ABC_2_trans 1145 1358
No external refs found!