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  5. Solyc05g015650.3.1

Solyc05g015650.3.1 (Solyc05g015650.3)


Aliases : Solyc05g015650.3

Description : 30.11 signalling.light Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains


Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g015650.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.02 Gene family
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.06 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.05 Gene family
LOC_Os01g69910 Os01g0923600 30.11 signalling.light Calmodulin-binding transcription... 0.03 Gene family
LOC_Os04g31900 Os04g0388500 30.11 signalling.light Calmodulin-binding transcription... 0.04 Gene family
LOC_Os07g43030 Os07g0623100 17.5.3 hormone... 0.05 Gene family
MA_10434871g0010 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
MA_10435485g0010 No alias 17.5.3 hormone... 0.01 Gene family
Smo441667 PACid_15409450 No description available 0.07 Gene family
Zm00001d014286 GRMZM2G341747 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family
Zm00001d022185 GRMZM2G017368 27.3.39 RNA.regulation of transcription.AtSR... 0.1 Gene family
Zm00001d030518 GRMZM2G153594 27.3.39 RNA.regulation of transcription.AtSR... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002909 IPT_dom 395 478
IPR020683 Ankyrin_rpt-contain_dom 614 687
IPR000048 IQ_motif_EF-hand-BS 829 848
IPR000048 IQ_motif_EF-hand-BS 806 824
IPR005559 CG-1_dom 14 127
No external refs found!