Solyc05g015210.3.1 (Solyc05g015210.3)


Aliases : Solyc05g015210.3

Description : 35.1 not assigned.no ontology Vacuolar sorting protein 39


Gene families : OG_01_0007459 (Gene family) Phylogenetic Tree(s): OG0007459_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g015210.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cre17.g709400 No alias No description available 0.04 Gene family
GSVIVT01013627001 No alias 35.1 not assigned.no ontology Vacuolar sorting protein 39 0.07 Gene family
LOC_Os05g01360 Os05g0104100 35.1 not assigned.no ontology Vacuolar sorting protein 39 0.04 Gene family
MA_1271g0010 No alias 35.1 not assigned.no ontology Vacuolar sorting protein 39 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan
BP GO:0016192 vesicle-mediated transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 658 821
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 832 939
IPR001180 CNH_dom 73 287
No external refs found!