Solyc05g015040.3.1 (Solyc05g015040.3)


Aliases : Solyc05g015040.3

Description : 27.1.2 RNA.processing.RNA helicase RNA helicase family protein


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g015040.3.1
Cluster HCCA cluster: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT1G26370 No alias RNA helicase family protein 0.02 Gene family
AT4G18465 No alias RNA helicase family protein 0.02 Gene family
GSVIVT01007911001 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.05 Gene family
LOC_Os01g11370 Os01g0212100 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
LOC_Os11g20554 Os11g0310800 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Smo233605 PACid_15401686 27.1 RNA.processing ATP-dependent RNA helicase, putative... 0.02 Gene family
Smo76120 PACid_15413436 No description available 0.02 Gene family
Zm00001d045147 GRMZM2G000371,... 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.04 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 12 165
No external refs found!