Aliases : EDF4, RAV1
Description : AP2-RAV-type transcription factor *(EDF) & original description: none
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00040300 | NGA1,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
AT1G13260 | EDF4, RAV1 | related to ABI3/VP1 1 | 0.02 | OrthoFinder output from all 47 species | |
AT1G68840 | EDF2, AtRAV2,... | related to ABI3/VP1 2 | 0.03 | OrthoFinder output from all 47 species | |
AT3G25730 | EDF3 | ethylene response DNA binding factor 3 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g058439 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g114045 | NGA1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aev_g32030 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g04649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11266 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G039200.1 | EDF4, RAV1,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g04025 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25414 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011947001 | EDF2, AtRAV2,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Gb_18035 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g04800.1 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g49830.1 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g49230.1 | LOC_Os04g49230 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g01860.1 | LOC_Os06g01860 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g06120.1 | NGA1, LOC_Os08g06120 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g39190.1 | NGA1, LOC_Os10g39190 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g27528 | NGA1 | RAV/NGATHA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_116574g0010 | EDF3 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | OrthoFinder output from all 47 species | |
MA_18923g0010 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | OrthoFinder output from all 47 species | |
MA_19420g0020 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
MA_3503583g0010 | NGA1 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
MA_70029g0010 | NGA1 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g47465 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g48790 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g11598 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g22199 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g23521 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g009790.1.1 | EDF4, RAV1,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29371 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000156_P001 | NGA3, Zm00001e000156 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016956_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020092_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023240_P001 | NGA3, Zm00001e023240 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e024165_P001 | Zm00001e024165 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026443_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028111_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032325_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039393_P002 | Zm00001e039393 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040214_P001 | NGA3, Zm00001e040214 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
CC | GO:0048046 | apoplast | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |