Solyc05g013930.2.1 (Solyc05g013930.2)


Aliases : Solyc05g013930.2

Description : 27.4 RNA.RNA binding Similar to terminal ear1 in Zea mays. A member of mei2-like gene family phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. terminal EAR1-like 1 (TEL1)


Gene families : OG_01_0001302 (Gene family) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g013930.2.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.08 Gene family
AT1G67770 TEL2 terminal EAR1-like 2 0.07 Gene family
AT3G26120 TEL1 terminal EAR1-like 1 0.02 Gene family
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.04 Gene family
GSVIVT01003988001 No alias 27.4 RNA.RNA binding Similar to terminal ear1 in Zea... 0.11 Gene family
GSVIVT01008932001 No alias No description available 0.03 Gene family
LOC_Os01g68000 Os01g0907900 27.4 RNA.RNA binding Similar to terminal ear1 in Zea... 0.02 Gene family
LOC_Os09g36140 Os09g0531200 27.4 RNA.RNA binding Similar to terminal ear1 in Zea... 0.02 Gene family
Zm00001d006207 GRMZM2G046313 27.4 RNA.RNA binding Similar to terminal ear1 in Zea... 0.03 Gene family
Zm00001d042445 GRMZM2G085113 27.4 RNA.RNA binding Similar to terminal ear1 in Zea... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 205 269
IPR007201 Mei2-like_Rrm_C 435 545
No external refs found!