Solyc05g013880.1.1 (Solyc05g013880.1)


Aliases : Solyc05g013880.1

Description : 35.1 not assigned.no ontology Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g013880.1.1
Cluster HCCA cluster: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Gene family
AT4G34380 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Gene family
GSVIVT01031882001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.04 Gene family
LOC_Os01g71780 Os01g0946100 31.1 cell.organisation Transducin/WD40 repeat-like... 0.06 Gene family
LOC_Os04g40560 Os04g0481600 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
MA_913477g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Smo66275 PACid_15406960 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc01g109120.3.1 Solyc01g109120.3 28.1 DNA.synthesis/chromatin structure Transducin/WD40... 0.02 Gene family
Solyc02g090150.1.1 Solyc02g090150.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.03 Gene family
Zm00001d003272 GRMZM2G022627 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 289 323
IPR001680 WD40_repeat 240 275
IPR001680 WD40_repeat 337 367
No external refs found!