Solyc05g013540.1.1 (Solyc05g013540.1)


Aliases : Solyc05g013540.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g013540.1.1
Cluster HCCA cluster: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 Gene family
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.04 Gene family
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
GSVIVT01036228001 No alias No description available 0.03 Gene family
LOC_Os03g09170 Os03g0191900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os05g25260 Os05g0316800 No description available 0.03 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os10g30840 No alias No description available 0.06 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_502153g0010 No alias No description available 0.04 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_7166g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_99821g0010 No alias No description available 0.02 Gene family
Solyc02g090790.1.1 Solyc02g090790.1 No description available 0.03 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 50 99
No external refs found!