Solyc05g012770.3.1 (Solyc05g012770.3)


Aliases : Solyc05g012770.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes WRKY DNA-binding protein 4 (WRKY4). WRKY DNA-binding protein 4 (WRKY4)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g012770.3.1
Cluster HCCA cluster: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT1G18860 WRKY61, ATWRKY61 WRKY DNA-binding protein 61 0.03 Gene family
AT1G62300 WRKY6, ATWRKY6 WRKY family transcription factor 0.03 Gene family
AT1G68150 WRKY9, ATWRKY9 WRKY DNA-binding protein 9 0.03 Gene family
AT2G23320 WRKY15 WRKY DNA-binding protein 15 0.05 Gene family
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.05 Gene family
AT2G38470 WRKY33, ATWRKY33 WRKY DNA-binding protein 33 0.02 Gene family
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.02 Gene family
AT2G40750 WRKY54, ATWRKY54 WRKY DNA-binding protein 54 0.03 Gene family
AT3G01080 ATWRKY58, WRKY58 WRKY DNA-binding protein 58 0.04 Gene family
AT3G56400 ATWRKY70, WRKY70 WRKY DNA-binding protein 70 0.02 Gene family
AT4G01250 WRKY22, AtWRKY22 WRKY family transcription factor 0.02 Gene family
AT4G04450 WRKY42, AtWRKY42 WRKY family transcription factor 0.01 Gene family
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.02 Gene family
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.02 Gene family
AT5G07100 WRKY26 WRKY DNA-binding protein 26 0.02 Gene family
AT5G49520 WRKY48, ATWRKY48 WRKY DNA-binding protein 48 0.02 Gene family
GSVIVT01007006001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01010525001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01015952001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01021252001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01021765001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01024624001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
GSVIVT01027069001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028244001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01029265001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01030258001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01030453001 No alias No description available 0.04 Gene family
GSVIVT01033188001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os01g14440 Os01g0246700 No description available 0.03 Gene family
LOC_Os01g53040 Os01g0730700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g54600 Os01g0750100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os03g20550 Os03g0321700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os03g55080 Os03g0758000,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os04g51560 Os04g0605100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g04640 Os05g0137500 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os09g16510 Os09g0334500 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
LOC_Os11g29870 Os11g0490900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
MA_10434651g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_120697g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_53351g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_74833g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Smo56793 PACid_15403639 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc01g095630.3.1 Solyc01g095630.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc02g021680.3.1 Solyc02g021680.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc05g012500.3.1 Solyc05g012500.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc08g008277.1.1 Solyc08g008277.1 No description available 0.02 Gene family
Solyc09g015770.3.1 Solyc09g015770.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d011527 GRMZM5G812272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d020137 GRMZM2G025895,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d020495 GRMZM2G169149 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d024768 GRMZM5G851490 No description available 0.02 Gene family
Zm00001d035323 GRMZM2G143765 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d039245 GRMZM5G871347 No description available 0.03 Gene family
Zm00001d040554 GRMZM2G327349 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d041740 GRMZM2G076657 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d043569 GRMZM2G040298 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d049173 GRMZM2G054125 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 395 452
IPR003657 WRKY_dom 216 272
No external refs found!