Solyc05g008050.2.1 (Solyc05g008050.2)


Aliases : Solyc05g008050.2

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family homeobox-leucine zipper protein 17 (HB17)


Gene families : OG_01_0000206 (Gene family) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g008050.2.1
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT3G60390 HAT3 homeobox-leucine zipper protein 3 0.03 Gene family
LOC_Os10g41230 Os10g0561800 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_860238g0010 No alias 33.99 development.unspecified Encodes homeobox protein... 0.01 Gene family
Solyc08g078300.3.1 Solyc08g078300.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d014628 GRMZM2G477415 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d014630 GRMZM2G307397 33.99 development.unspecified Encodes homeobox protein... 0.03 Gene family
Zm00001d044081 GRMZM2G126239 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 44 98
IPR003106 Leu_zip_homeo 100 134
No external refs found!