Solyc05g007890.3.1 (Solyc05g007890.3)


Aliases : Solyc05g007890.3

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP Homeodomain-like superfamily protein


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g007890.3.1
Cluster HCCA cluster: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT3G12730 No alias Homeodomain-like superfamily protein 0.03 Gene family
AT5G42630 KAN4, ATS Homeodomain-like superfamily protein 0.05 Gene family
GSVIVT01028403001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01033381001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01036717001 No alias No description available 0.03 Gene family
LOC_Os06g35140 Os06g0543200 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
MA_21538g0020 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d002439 GRMZM2G125704 27.3.20 RNA.regulation of transcription.G2-like... 0.05 Gene family
Zm00001d020020 GRMZM2G173943 No description available 0.04 Gene family
Zm00001d038546 GRMZM2G117854 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d046947 GRMZM2G081671 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 149 196
IPR001005 SANT/Myb 24 75
No external refs found!