Aliases : Solyc05g007880.3
Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2 (CDF2)
Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Solyc05g007880.3.1 | |
Cluster | HCCA cluster: Cluster_76 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G26790 | No alias | Dof-type zinc finger DNA-binding family protein | 0.1 | Gene family | |
AT3G47500 | CDF3 | cycling DOF factor 3 | 0.05 | Gene family | |
AT5G62430 | CDF1 | cycling DOF factor 1 | 0.08 | Gene family | |
Cre12.g521150 | No alias | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.02 | Gene family | |
GSVIVT01011433001 | No alias | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.03 | Gene family | |
GSVIVT01019969001 | No alias | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.09 | Gene family | |
GSVIVT01029943001 | No alias | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.04 | Gene family | |
LOC_Os01g15900 | Os01g0264000 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.04 | Gene family | |
LOC_Os07g48570 | Os07g0685000 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.04 | Gene family | |
Solyc03g115940.3.1 | Solyc03g115940.3 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.03 | Gene family | |
Zm00001d013724 | GRMZM2G061292 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.03 | Gene family | |
Zm00001d022525 | No alias | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.03 | Gene family | |
Zm00001d027846 | GRMZM2G162749 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.02 | Gene family | |
Zm00001d040362 | GRMZM2G089949 | 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... | 0.04 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 112 | 168 |
No external refs found! |