Solyc05g006340.3.1 (Solyc05g006340.3)


Aliases : Solyc05g006340.3

Description : 35.1 not assigned.no ontology Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g006340.3.1
Cluster HCCA cluster: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT1G47610 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Gene family
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
GSVIVT01007589001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
GSVIVT01031882001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
LOC_Os01g13140 Os01g0232200 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
MA_10427021g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
MA_370291g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc02g090150.1.1 Solyc02g090150.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.02 Gene family
Zm00001d041381 GRMZM2G368126 31.1 cell.organisation Transducin/WD40 repeat-like... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 359 411
IPR001680 WD40_repeat 272 306
IPR001680 WD40_repeat 187 217
IPR001680 WD40_repeat 228 260
IPR001680 WD40_repeat 320 350
No external refs found!