Solyc05g006050.3.1 (Solyc05g006050.3)


Aliases : Solyc05g006050.3

Description : 31.3 cell.cycle Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination. CYCLIN D11 (CYCD11)


Gene families : OG_01_0000097 (Gene family) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g006050.3.1
Cluster HCCA cluster: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.04 Gene family
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.04 Gene family
AT5G67260 CYCD3;2 CYCLIN D3;2 0.03 Gene family
GSVIVT01000125001 No alias 31.3 cell.cycle core cell cycle genes cyclin d51 (CYCD51) 0.02 Gene family
GSVIVT01003674001 No alias 31.3 cell.cycle Cyclin D61 (CYCD61) 0.05 Gene family
GSVIVT01006022001 No alias 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.02 Gene family
GSVIVT01020167001 No alias 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.02 Gene family
LOC_Os03g42070 Os03g0617500 31.3 cell.cycle core cell cycle genes cyclin d51 (CYCD51) 0.02 Gene family
Smo15078 PACid_15411299 No description available 0.03 Gene family
Zm00001d005293 GRMZM2G161382 31.2 cell.division encodes a cyclin D-type protein... 0.02 Gene family
Zm00001d019696 GRMZM2G107377 No description available 0.03 Gene family
Zm00001d050475 No alias 31.3 cell.cycle encodes a D-type cyclin whose... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 51 178
IPR004367 Cyclin_C-dom 181 290
No external refs found!