Solyc05g005650.2.1 (Solyc05g005650.2)


Aliases : Solyc05g005650.2

Description : 27.3.59 RNA.regulation of transcription.Methyl binding domain proteins Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes. methyl-CPG-binding domain 9 (MBD9)


Gene families : OG_01_0004127 (Gene family) Phylogenetic Tree(s): OG0004127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g005650.2.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G01460 ATMBD9, MBD9 methyl-CPG-binding domain 9 0.08 Gene family
MA_10435977g0020 No alias 27.3.59 RNA.regulation of transcription.Methyl binding... 0.04 Gene family
MA_41907g0010 No alias 27.3.59 RNA.regulation of transcription.Methyl binding... 0.08 Gene family
Zm00001d053697 GRMZM2G084296,... 27.3.59 RNA.regulation of transcription.Methyl binding... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!