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  5. Aev_g44072

Aev_g44072


Description : not classified & original description: none


Gene families : OG0012110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g44072
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.03 OrthoFinder output from all 47 species
Gb_13517 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 OrthoFinder output from all 47 species
Smo84012 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 OrthoFinder output from all 47 species
Zm00001e038437_P002 Zm00001e038437 Pentatricopeptide repeat-containing protein At5g02830,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002625 Smr_dom 437 505
IPR002885 Pentatricopeptide_repeat 287 343
IPR033443 PPR_long 3 163
No external refs found!