Solyc05g005190.3.1 (Solyc05g005190.3)


Aliases : Solyc05g005190.3

Description : 29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)


Gene families : OG_01_0000487 (Gene family) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g005190.3.1
Cluster HCCA cluster: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 Gene family
AT1G23490 ATARF1, ARF1,... ADP-ribosylation factor 1 0.04 Gene family
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.03 Gene family
LOC_Os01g16030 Os01g0265100 No description available 0.02 Gene family
LOC_Os07g12200 Os07g0223400 29.4 protein.postranslational modification Gene encoding... 0.02 Gene family
Smo140818 PACid_15409714 No description available 0.02 Gene family
Zm00001d008295 GRMZM2G015361 29.3.4.99 protein.targeting.secretory... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!