Solyc04g082690.1.1 (Solyc04g082690.1)


Aliases : Solyc04g082690.1

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g082690.1.1
Cluster HCCA cluster: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.07 Gene family
AT4G09120 No alias RING/U-box superfamily protein 0.04 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G07040 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g15100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.03 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.03 Gene family
MA_10429091g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_159453g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_19072g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_226198g0010 No alias No description available 0.02 Gene family
MA_289646g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
MA_6931619g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo96631 PACid_15409293 No description available 0.04 Gene family
Solyc01g109200.3.1 Solyc01g109200.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc11g005290.2.1 Solyc11g005290.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d007609 GRMZM2G041549 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016837 GRMZM2G108085 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d040638 No alias No description available 0.04 Gene family
Zm00001d045077 GRMZM2G151913 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 97 140
No external refs found!