Solyc04g082670.3.1 (Solyc04g082670.3)


Aliases : Solyc04g082670.3

Description : 29.7 protein.glycosylation Ribophorin I


Gene families : OG_01_0004037 (Gene family) Phylogenetic Tree(s): OG0004037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g082670.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G76400 No alias Ribophorin I 0.12 Gene family
Cpa|evm.model.tig00020904.55 No alias 29.7 protein.glycosylation Ribophorin I 0.02 Gene family
Cre12.g523300 No alias 29.7 protein.glycosylation Ribophorin I 0.05 Gene family
GSVIVT01013410001 No alias 29.7 protein.glycosylation Ribophorin I 0.07 Gene family
LOC_Os05g23600 Os05g0301500 29.7 protein.glycosylation Ribophorin I 0.04 Gene family
Smo228671 PACid_15409309 No description available 0.08 Gene family
Zm00001d002944 GRMZM2G177273 29.7 protein.glycosylation Ribophorin I 0.05 Gene family
Zm00001d027484 GRMZM2G032409 29.7 protein.glycosylation Ribophorin I 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA InterProScan
CC GO:0005783 endoplasmic reticulum IEA InterProScan
BP GO:0006486 protein glycosylation IEA InterProScan
CC GO:0016021 integral component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 94 202
IPR007676 Ribophorin_I 203 592
No external refs found!