Solyc04g082440.3.1 (Solyc04g082440.3)


Aliases : Solyc04g082440.3

Description : 20.1 stress.biotic Plant U-Box 15 (PUB15)


Gene families : OG_01_0006396 (Gene family) Phylogenetic Tree(s): OG0006396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g082440.3.1
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT5G42340 PUB15 Plant U-Box 15 0.09 Gene family
LOC_Os06g51130 Os06g0726900 20.1 stress.biotic Plant U-Box 15 (PUB15) 0.03 Gene family
LOC_Os08g37570 Os08g0481200 20.1 stress.biotic Plant U-Box 15 (PUB15) 0.05 Gene family
Zm00001d031263 GRMZM2G136313 20.1 stress.biotic Plant U-Box 15 (PUB15) 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 274 344
IPR000225 Armadillo 397 436
IPR000225 Armadillo 480 518
No external refs found!