Solyc04g081570.3.1 (Solyc04g081570.3)


Aliases : Solyc04g081570.3

Description : 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. SHEPHERD (SHD)


Gene families : OG_01_0000390 (Gene family) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g081570.3.1
Cluster HCCA cluster: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT4G24190 AtHsp90.7,... Chaperone protein htpG family protein 0.11 Gene family
AT5G52640 HSP81-1, HSP83,... heat shock protein 90.1 0.03 Gene family
AT5G56000 Hsp81.4, AtHsp90.4 HEAT SHOCK PROTEIN 81.4 0.02 Gene family
Cpa|evm.model.tig00021126.11 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.01 Gene family
Cre02.g080650 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.08 Gene family
Cre09.g386750 No alias No description available 0.02 Gene family
GSVIVT01009931001 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.07 Gene family
LOC_Os04g01740 Os04g0107900 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.02 Gene family
LOC_Os06g50300 Os06g0716700 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.06 Gene family
LOC_Os08g39140 Os08g0500700 No description available 0.02 Gene family
LOC_Os09g30418 Os09g0482550,... No description available 0.02 Gene family
MA_10431031g0010 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.02 Gene family
Smo151384 PACid_15416223 No description available 0.02 Gene family
Smo267300 PACid_15410445 No description available 0.02 Gene family
Smo440901 PACid_15408618 No description available 0.04 Gene family
Solyc12g015880.2.1 Solyc12g015880.2 No description available 0.01 Gene family
Zm00001d036401 GRMZM2G141931 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006457 protein folding IEA InterProScan
MF GO:0051082 unfolded protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001404 Hsp90_fam 259 800
IPR003594 HATPase_C 101 256
No external refs found!