Solyc04g080910.1.1 (Solyc04g080910.1)


Aliases : Solyc04g080910.1

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g080910.1.1
Cluster HCCA cluster: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
Cre16.g649433 No alias No description available 0.01 Gene family
GSVIVT01018271001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01027770001 No alias No description available 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g46250 Os04g0547600 No description available 0.03 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os05g36100 Os05g0437050,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.03 Gene family
LOC_Os08g45110 Os08g0565200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_19683g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_2407076g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_4929994g0010 No alias No description available 0.01 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.02 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.03 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.03 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.03 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.02 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 30 79
No external refs found!