Solyc04g079600.3.1 (Solyc04g079600.3)


Aliases : Solyc04g079600.3

Description : 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis. ABERRANT TESTA SHAPE (ATS)


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g079600.3.1
Cluster HCCA cluster: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000606001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.07 Gene family
LOC_Os08g06370 Os08g0160300 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
LOC_Os09g23200 Os09g0395300 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
MA_84935g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Zm00001d017702 GRMZM2G060834 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 126 177
No external refs found!