Solyc04g078690.3.1 (Solyc04g078690.3)


Aliases : Solyc04g078690.3

Description : 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy. SPATULA (SPT)


Gene families : OG_01_0000461 (Gene family) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g078690.3.1
Cluster HCCA cluster: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028238001 No alias 30.11 signalling.light Transcription factor interacting... 0.02 Gene family
LOC_Os02g56140 Os02g0805250 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 138 184
No external refs found!