Solyc04g078640.2.1 (Solyc04g078640.2)


Aliases : Solyc04g078640.2

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g078640.2.1
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.04 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.07 Gene family
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.03 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.05 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01013914001 No alias No description available 0.03 Gene family
GSVIVT01013917001 No alias No description available 0.03 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01030515001 No alias No description available 0.04 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.05 Gene family
LOC_Os02g09650 Os02g0189500 No description available 0.04 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g34260 Os02g0546600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.03 Gene family
LOC_Os03g08500 Os03g0183300 No description available 0.02 Gene family
LOC_Os03g60120 Os03g0815800 No description available 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os05g49700 Os05g0572000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g09390 Os06g0194000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.05 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.03 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10274g0010 No alias No description available 0.02 Gene family
MA_1037g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_314205g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_364562g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_40048g0010 No alias No description available 0.03 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_4072g0020 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_81029g0010 No alias No description available 0.03 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.04 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc03g120840.2.1 Solyc03g120840.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.03 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.04 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d009103 GRMZM2G053503 No description available 0.05 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.04 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.04 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d043204 GRMZM2G002119 No description available 0.02 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.07 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 35 83
No external refs found!