Solyc04g078470.3.1 (Solyc04g078470.3)


Aliases : Solyc04g078470.3

Description : 31.2 cell.division encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D31 (CYCD31)


Gene families : OG_01_0000097 (Gene family) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g078470.3.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.03 Gene family
AT5G67260 CYCD3;2 CYCLIN D3;2 0.06 Gene family
GSVIVT01000125001 No alias 31.3 cell.cycle core cell cycle genes cyclin d51 (CYCD51) 0.02 Gene family
GSVIVT01000226001 No alias 31.3 cell.cycle Encode CYCD33, a CYCD3 D-type cyclin. ... 0.04 Gene family
GSVIVT01003175001 No alias 31.3 cell.cycle Encode CYCD32, a CYCD3 D-type cyclin. ... 0.04 Gene family
GSVIVT01003674001 No alias 31.3 cell.cycle Cyclin D61 (CYCD61) 0.03 Gene family
GSVIVT01009353001 No alias 31.3 cell.cycle core cell cycle genes cyclin d51 (CYCD51) 0.03 Gene family
GSVIVT01009432001 No alias 31.2 cell.division encodes a cyclin D-type protein... 0.08 Gene family
GSVIVT01020167001 No alias 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.02 Gene family
LOC_Os09g02360 Os09g0111100 31.3 cell.cycle Encode CYCD33, a CYCD3 D-type cyclin. ... 0.03 Gene family
MA_10429174g0030 No alias 31.2 cell.division encodes a cyclin D-type protein... 0.03 Gene family
MA_10436212g0010 No alias 31.3 cell.cycle Encodes a D-type cyclin CYCD41 that... 0.03 Gene family
MA_114375g0010 No alias 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.04 Gene family
MA_172842g0010 No alias 31.3 cell.cycle Encode CYCD33, a CYCD3 D-type cyclin. ... 0.04 Gene family
MA_559426g0020 No alias 31.2 cell.division encodes a cyclin D-type protein... 0.02 Gene family
Solyc12g088650.2.1 Solyc12g088650.2 31.3 cell.cycle Encode CYCD32, a CYCD3 D-type cyclin. ... 0.04 Gene family
Zm00001d005293 GRMZM2G161382 31.2 cell.division encodes a cyclin D-type protein... 0.05 Gene family
Zm00001d013728 GRMZM2G377194 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.03 Gene family
Zm00001d019696 GRMZM2G107377 No description available 0.05 Gene family
Zm00001d020353 GRMZM2G476685 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.03 Gene family
Zm00001d020772 GRMZM2G140633 31.3 cell.cycle Encodes a cyclin involved in cell... 0.04 Gene family
Zm00001d031837 GRMZM2G133413 31.3 cell.cycle Encodes a cyclin involved in cell... 0.04 Gene family
Zm00001d033330 GRMZM2G056303 31.3 cell.cycle core cell cycle genes cyclin d51 (CYCD51) 0.02 Gene family
Zm00001d049334 GRMZM2G051042 31.3 cell.cycle encodes a D-type cyclin whose... 0.02 Gene family
Zm00001d050475 No alias 31.3 cell.cycle encodes a D-type cyclin whose... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 53 182
IPR004367 Cyclin_C-dom 184 280
No external refs found!