Solyc04g077190.3.1 (Solyc04g077190.3)


Aliases : Solyc04g077190.3

Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Encodes a protein with xylanase activity. RXF12


Gene families : OG_01_0002111 (Gene family) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g077190.3.1
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.06 Gene family
LOC_Os01g04290 Os01g0134800 35.1 not assigned.no ontology Encodes a putative... 0.05 Gene family
LOC_Os01g04300 Os01g0134900 10.6.2 cell... 0.04 Gene family
LOC_Os03g47010 Os03g0672900 10.6.2 cell... 0.03 Gene family
LOC_Os05g23350 Os05g0298700 35.1 not assigned.no ontology Encodes a putative... 0.03 Gene family
Zm00001d013561 GRMZM2G002260 10.6.2 cell... 0.04 Gene family
Zm00001d039946 GRMZM2G003794 35.1 not assigned.no ontology Encodes a putative... 0.03 Gene family
Zm00001d039958 GRMZM2G031004 35.1 not assigned.no ontology Encodes a putative... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 424 563
IPR003305 CenC_carb-bd 252 389
IPR003305 CenC_carb-bd 80 219
IPR001000 GH10 623 880
No external refs found!