Aliases : Solyc04g072850.3
Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Glycosyl hydrolase family protein
Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Solyc04g072850.3.1 | |
Cluster | HCCA cluster: Cluster_287 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01006776001 | No alias | 10.6.2 cell... | 0.02 | Gene family | |
GSVIVT01009003001 | No alias | 10.6.2 cell... | 0.03 | Gene family | |
LOC_Os01g19220 | Os01g0296700 | 10.6.2 cell... | 0.02 | Gene family | |
LOC_Os04g54810 | Os04g0640700 | 10.6.2 cell... | 0.02 | Gene family | |
LOC_Os11g18730 | Os11g0291450,... | 10.6.2 cell... | 0.02 | Gene family | |
MA_140124g0010 | No alias | 10.6.2 cell... | 0.02 | Gene family | |
Solyc11g044910.2.1 | Solyc11g044910.2 | 10.6.2 cell... | 0.03 | Gene family | |
Zm00001d026415 | GRMZM2G136895 | 10.6.2 cell... | 0.03 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | InterProScan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002772 | Glyco_hydro_3_C | 1769 | 1998 |
IPR002772 | Glyco_hydro_3_C | 1025 | 1253 |
IPR026891 | Fn3-like | 548 | 615 |
IPR026891 | Fn3-like | 1320 | 1386 |
IPR026891 | Fn3-like | 2066 | 2132 |
IPR002772 | Glyco_hydro_3_C | 250 | 479 |
IPR001764 | Glyco_hydro_3_N | 4 | 208 |
IPR001764 | Glyco_hydro_3_N | 1475 | 1726 |
IPR001764 | Glyco_hydro_3_N | 728 | 982 |
No external refs found! |