Solyc04g072300.1.1 (Solyc04g072300.1)


Aliases : Solyc04g072300.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g072300.1.1
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.03 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01008649001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
GSVIVT01035911001 No alias No description available 0.03 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.03 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.08 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os07g22770 Os07g0410700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_116185g0010 No alias No description available 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_3405g0010 No alias No description available 0.02 Gene family
MA_40048g0010 No alias No description available 0.02 Gene family
MA_4072g0020 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_77420g0010 No alias No description available 0.03 Gene family
MA_922309g0010 No alias No description available 0.02 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo80895 PACid_15408472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.04 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.02 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.03 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.02 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017478 GRMZM2G041839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019096 GRMZM2G379652 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d023535 GRMZM2G544539 No description available 0.03 Gene family
Zm00001d025477 GRMZM2G424348 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026184 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.04 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.04 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.02 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.02 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 24 66
No external refs found!