Solyc04g072265.1.1 (Solyc04g072265.1)


Aliases : Solyc04g072265.1

Description : 29.2.2 protein.synthesis.ribosome biogenesis ATPasesnucleotide bindingATP bindingnucleoside-triphosphatasestranscription factor binding


Gene families : OG_01_0002936 (Gene family) Phylogenetic Tree(s): OG0002936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g072265.1.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G67120 No alias ATPases;nucleotide binding;ATP... 0.18 Gene family
Cpa|evm.model.tig00000403.82 No alias 29.2.2 protein.synthesis.ribosome biogenesis... 0.03 Gene family
Cre03.g161800 No alias No description available 0.04 Gene family
GSVIVT01016794001 No alias 29.2.2 protein.synthesis.ribosome biogenesis... 0.15 Gene family
LOC_Os10g31856 Os10g0456900 29.2.2 protein.synthesis.ribosome biogenesis... 0.02 Gene family
LOC_Os10g31864 Os10g0456950 29.2.2 protein.synthesis.ribosome biogenesis... 0.04 Gene family
MA_12093g0010 No alias 29.2.2 protein.synthesis.ribosome biogenesis... 0.05 Gene family
MA_91092g0010 No alias 29.2.2 protein.synthesis.ribosome biogenesis... 0.1 Gene family
MA_91092g0020 No alias 29.2.2 protein.synthesis.ribosome biogenesis... 0.05 Gene family
Zm00001d038475 GRMZM2G092001,... 29.2.2 protein.synthesis.ribosome biogenesis... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011704 ATPase_dyneun-rel_AAA 834 920
IPR011704 ATPase_dyneun-rel_AAA 1805 1944
IPR011704 ATPase_dyneun-rel_AAA 1386 1432
IPR011704 ATPase_dyneun-rel_AAA 1086 1222
IPR011704 ATPase_dyneun-rel_AAA 685 732
IPR011704 ATPase_dyneun-rel_AAA 366 503
IPR011704 ATPase_dyneun-rel_AAA 1479 1609
IPR011704 ATPase_dyneun-rel_AAA 2283 2365
No external refs found!