Solyc04g071930.3.1 (Solyc04g071930.3)


Aliases : Solyc04g071930.3

Description : 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions. one-helix protein 2 (OHP2)


Gene families : OG_01_0005105 (Gene family) Phylogenetic Tree(s): OG0005105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g071930.3.1
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT1G34000 OHP2 one-helix protein 2 0.19 Gene family
Cre06.g251150 No alias 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.03 Gene family
LOC_Os01g40710 Os01g0589800 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.04 Gene family
MA_17658g0010 No alias 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.02 Gene family
Smo174988 PACid_15421525 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.05 Gene family
Zm00001d011256 GRMZM2G143469 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.06 Gene family
Zm00001d044335 GRMZM2G019807 1.1.2.1 PS.lightreaction.photosystem I.LHC-I Encodes a... 0.11 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!