Solyc04g063290.3.1 (Solyc04g063290.3)


Aliases : Solyc04g063290.3

Description : 29.2.1.2.1.2 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2 Ribosomal protein S5 family protein


Gene families : OG_01_0001422 (Gene family) Phylogenetic Tree(s): OG0001422_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g063290.3.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G41840 No alias Ribosomal protein S5 family protein 0.38 Gene family
AT3G57490 No alias Ribosomal protein S5 family protein 0.07 Gene family
Cpa|evm.model.tig00020961.135 No alias 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.15 Gene family
Cre01.g039250 No alias 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.16 Gene family
GSVIVT01033299001 No alias 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.15 Gene family
LOC_Os03g59310 Os03g0807800 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.39 Gene family
LOC_Os07g10660 Os07g0207400 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.31 Gene family
MA_158470g0010 No alias 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.05 Gene family
Smo67484 PACid_15411576 No description available 0.2 Gene family
Zm00001d013034 No alias 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.33 Gene family
Zm00001d019147 GRMZM2G168149 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.25 Gene family
Zm00001d034550 GRMZM2G092663 29.2.1.2.1.2 protein.synthesis.ribosomal... 0.35 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 87 151
IPR005324 Ribosomal_S5_C 170 236
No external refs found!