1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g054480.3.1

Solyc04g054480.3.1 (Solyc04g054480.3)


Aliases : Solyc04g054480.3

Description : 35.1.19 not assigned.no ontology.C2 domain-containing protein binding


Gene families : OG_01_0002154 (Gene family) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g054480.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT2G22125 CSI1 binding 0.02 Gene family
GSVIVT01022187001 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.05 Gene family
LOC_Os06g11990 Os06g0223800 35.1.19 not assigned.no ontology.C2 domain-containing... 0.11 Gene family
LOC_Os11g08090 Os11g0183800 No description available 0.04 Gene family
MA_10434233g0010 No alias No description available 0.02 Gene family
Smo78846 PACid_15402275 35.1.19 not assigned.no ontology.C2 domain-containing... 0.09 Gene family
Solyc11g017460.2.1 Solyc11g017460.2 No description available 0.02 Gene family
Zm00001d044845 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 89 119
IPR000008 C2_dom 1649 1741
No external refs found!