Pp3c6_2570V3.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0001027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001027_tree ,
OG_02_0000803 (LandPlants) Phylogenetic Tree(s): OG_02_0000803_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_2570V3.1
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AT1G66260 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida
AT5G37720 ALY4 ALWAYS EARLY 4 0.03 Archaeplastida
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
GSVIVT01030785001 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
MA_44083g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
AT1G66260 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 LandPlants
AT5G37720 ALY4 ALWAYS EARLY 4 0.03 LandPlants
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 LandPlants
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 LandPlants
GSVIVT01030785001 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 LandPlants
LOC_Os03g17010.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.01 LandPlants
LOC_Os06g14470.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
LOC_Os08g33120.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
MA_44083g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025715 FoP_C 221 272
IPR000504 RRM_dom 110 178
No external refs found!