Solyc04g054260.3.1 (Solyc04g054260.3)


Aliases : Solyc04g054260.3

Description : 16.2.1.8 secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1 (FAH1)


Gene families : OG_01_0000016 (Gene family) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g054260.3.1
Cluster HCCA cluster: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT2G24180 CYP71B6 cytochrome p450 71b6 0.02 Gene family
AT2G30750 CYP71A12 cytochrome P450, family 71, subfamily A, polypeptide 12 0.03 Gene family
AT2G30770 CYP71A13 cytochrome P450, family 71, subfamily A, polypeptide 13 0.02 Gene family
AT3G48270 CYP71A26 cytochrome P450, family 71, subfamily A, polypeptide 26 0.02 Gene family
AT3G48290 CYP71A24 cytochrome P450, family 71, subfamily A, polypeptide 24 0.02 Gene family
AT4G13310 CYP71A20 cytochrome P450, family 71, subfamily A, polypeptide 20 0.02 Gene family
AT4G20235 CYP71A28 cytochrome P450, family 71, subfamily A, polypeptide 28 0.03 Gene family
AT5G24950 CYP71A15 cytochrome P450, family 71, subfamily A, polypeptide 15 0.03 Gene family
AT5G25130 CYP71B12 cytochrome P450, family 71, subfamily B, polypeptide 12 0.02 Gene family
GSVIVT01009607001 No alias 26.10 misc.cytochrome P450 member of CYP82C "cytochrome... 0.03 Gene family
GSVIVT01009854001 No alias 26.10 misc.cytochrome P450 Encodes an oxime-metabolizing... 0.02 Gene family
GSVIVT01009855001 No alias 26.10 misc.cytochrome P450 Encodes an oxime-metabolizing... 0.03 Gene family
GSVIVT01023303001 No alias 26.10 misc.cytochrome P450 member of CYP82C "cytochrome... 0.03 Gene family
LOC_Os01g12750 Os01g0227500 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
LOC_Os09g36080 Os09g0530300 26.10 misc.cytochrome P450 putative cytochrome P450... 0.03 Gene family
MA_17680g0010 No alias 26.10 misc.cytochrome P450 putative cytochrome P450... 0.03 Gene family
MA_177813g0010 No alias 16.8.3.3 secondary... 0.02 Gene family
MA_181562g0010 No alias 16.8.3.3 secondary... 0.02 Gene family
MA_19517g0010 No alias 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
MA_3092g0010 No alias 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
MA_353950g0010 No alias 26.10 misc.cytochrome P450 putative cytochrome P450... 0.03 Gene family
MA_599277g0010 No alias 16.8.3.3 secondary... 0.03 Gene family
MA_7973655g0010 No alias 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
MA_874669g0010 No alias 16.8.3.3 secondary... 0.02 Gene family
MA_9790396g0010 No alias 16.8.3.3 secondary... 0.03 Gene family
Smo77761 PACid_15420930 16.8.3.3 secondary... 0.02 Gene family
Solyc03g111930.3.1 Solyc03g111930.3 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
Solyc03g111973.1.1 Solyc03g111973.1 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
Solyc04g007940.3.1 Solyc04g007940.3 26.10 misc.cytochrome P450 member of CYP82C "cytochrome... 0.04 Gene family
Solyc04g054250.3.1 Solyc04g054250.3 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Solyc12g042480.2.1 Solyc12g042480.2 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Solyc12g044987.1.1 Solyc12g044987.1 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Solyc12g045020.2.1 Solyc12g045020.2 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Zm00001d006203 GRMZM2G113618 26.10 misc.cytochrome P450 cytochrome P450 monooxygenase... 0.02 Gene family
Zm00001d048705 GRMZM2G063756 26.10 misc.cytochrome P450 putative cytochrome P450... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001128 Cyt_P450 31 484
No external refs found!